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SRX12963569: Amplicon seq of ITS: Exodeconus integrifolius
1 ILLUMINA (Illumina MiSeq) run: 209,306 spots, 121.7M bases, 67.8Mb downloads

Design: MiSeq Reagent Kit v2, 600 cycles (Illumina) was used for paired-end sequencing (2 250 bp)
Submitted by: Universidad Mayor
Study: The Fungal and Bacterial Rhizosphere Microbiome of Solanaceae plants inhabiting the Atacama Desert
show Abstracthide Abstract
Understanding the mechanisms by which the rhizosphere microbiome contribute to the adaptation and tolerance of plants growing under extreme conditions can lead to the development of novel agricultural technologies. The Atacama Desert (AD) is among the most extreme environments on Earth, where inhabiting plants face the lack of rainfall, high salinity and extreme temperature oscillations. Nevertheless, several members of the family Solanaceae are capable of thriving under these adverse conditions. Using high-throughput amplicon sequencing, we explored the composition and diversity of fungal and bacterial communities of the rhizosphere of five Solanaceae species growing in the AD.
Sample:
SAMN22866059 • SRS10905260 • All experiments • All runs
Organism: root metagenome
Library:
Name: ITS25
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 209,306 spots, 121.7M bases, 67.8Mb
Run# of Spots# of BasesSizePublished
SRR16763434209,306121.7M67.8Mb2022-12-31

ID:
17643893

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